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NixOS CUDA

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CUDA packages maintenance and support in nixpkgs | https://github.com/orgs/NixOS/projects/27/ | https://nixos.org/manual/nixpkgs/unstable/#cuda42 Servers

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1 Aug 2024
@yorickvp:matrix.orgyorickvpI'll try to repro with torch on nixos-unstable15:57:23
@yorickvp:matrix.orgyorickvpyeah, ${python3.pkgs.torchWithCuda.lib}/lib/libtorch_cuda.so links to gcc-12.4.0-lib16:16:14
@ss:someonex.netSomeoneSerge (utc+3)Wow16:40:20
@ss:someonex.netSomeoneSerge (utc+3)This looks like a regression16:40:27
@ss:someonex.netSomeoneSerge (utc+3) Well the first obvious leak (the one we see in the wrapper) is https://github.com/NixOS/nixpkgs/blob/fc27807b85986bb26a8f28e590e01fae742e6b53/pkgs/build-support/cc-wrapper/default.nix#L596-L606 16:53:54
@ss:someonex.netSomeoneSerge (utc+3) Notably, cudaPackages.saxpy works fine at that commit 16:54:12
@ss:someonex.netSomeoneSerge (utc+3) I'm running github:NixOS/nixpkgs/c66e984bda09e7230ea7b364e677c5ba4f0d36d0#opencv4.tests.no-libstdcxx-errors now (only defined for cudaSupport = true) 16:54:41
@ss:someonex.netSomeoneSerge (utc+3)Going to take a while16:54:45
@ss:someonex.netSomeoneSerge (utc+3)But it might be the regression is somehow magically torch specific16:54:59
@ss:someonex.netSomeoneSerge (utc+3) No idea why https://github.com/NixOS/nixpkgs/blame/fc27807b85986bb26a8f28e590e01fae742e6b53/pkgs/build-support/cc-wrapper/default.nix#L605-L606 uses cc_solib honestly 16:55:53
@yorickvp:matrix.orgyorickvpyou know, I blame cmake17:00:59
@yorickvp:matrix.orgyorickvp * you know, I blame cmake :)17:01:03
@yorickvp:matrix.orgyorickvplooking at 36 megabytes of cmake logs, it obviously parses it out of some gcc output (together with the correct one, which it puts first in the path). I'm not sure what it does with it after17:02:50
@ss:someonex.netSomeoneSerge (utc+3)Waiting for opencv, but so far I'm leaning towards "maybe pytorch devs replaced some of the cmake logic with an unnecessary gcc -print-search-paths"17:06:46
@yorickvp:matrix.orgyorickvpI'm looking at https://github.com/Kitware/CMake/blob/master/Modules/CMakeParseImplicitLinkInfo.cmake17:08:01
@ss:someonex.netSomeoneSerge (utc+3)saxpy and opencv are built using cmake too17:08:34
@ss:someonex.netSomeoneSerge (utc+3)At least one of them has been shown to still work (whatever the cost)17:08:56
@ss:someonex.netSomeoneSerge (utc+3)
gy skimage.transform skimage.util skimage.segmentation
python3-3.11.9-env> building '/nix/store/4rqjcjk4h2mnfwsbvcgf3igjnmpxhxwf-python3-3.11.9-env.drv'
python3-3.11.9-env> created 521 symlinks in user environment
opencv-4.9.0-libstdcxx-test> building '/nix/store/2gh11xabzlxbfgvydhcln0qbfiharw32-opencv-4.9.0-libstdcxx-test.drv'
┏━ Dependency Graph:
┃             ┌─ ✔ opencv-4.9.0 ⏱ 17m40s
┃          ┌─ ✔ python3.11-pillow-heif-0.16.0 ⏱ 2m0s
┃       ┌─ ✔ python3.11-imageio-2.34.2 ⏱ 11s
┃    ┌─ ✔ python3.11-scikit-image-0.22.0 ⏱ 1m37s
┃ ┌─ ✔ python3-3.11.9-env ⏱ 1s
┃ ✔ opencv-4.9.0-libstdcxx-test 
┣━━━ Builds         
┗━ ∑ ⏵ 0 │ ✔ 6 │ ⏸ 0 │ Finished at 17:11:37 after 21m35s
17:12:13
@ss:someonex.netSomeoneSerge (utc+3)So ugh at least opencv4's python extension must be linking the right libstdc++17:13:11
@ss:someonex.netSomeoneSerge (utc+3) Hmm the last torch update was almost two months ago https://github.com/NixOS/nixpkgs/pull/317576 17:14:41
@ss:someonex.netSomeoneSerge (utc+3) * Hmm the last merged torch update was almost two months ago https://github.com/NixOS/nixpkgs/pull/317576 17:14:45
@ss:someonex.netSomeoneSerge (utc+3) yorickvp would you volunteer to run the bisection? 🫠 17:15:40
@yorickvp:matrix.orgyorickvpsure, do you have a known working commit?17:15:47
@ss:someonex.netSomeoneSerge (utc+3)

Well, I got a workstation sat

Revision:      b2852eb9365c6de48ffb0dc2c9562591f652242a
Last modified: 2024-06-27 16:44:53

Let me check if torch actually works there

17:16:31
@ss:someonex.netSomeoneSerge (utc+3)
❯ nix-shell -p 'python3.withPackages (ps: [ ps.torch ])'
trace: warning: cudaPackages.autoAddDriverRunpath is deprecated, use pkgs.autoAddDriverRunpath instead
trace: warning: cudaPackages.autoFixElfFiles is deprecated, use pkgs.autoFixElfFiles instead
trace: warning: cudaPackages.autoAddOpenGLRunpathHook is deprecated, use pkgs.autoAddDriverRunpathHook instead
this derivation will be built:
  /nix/store/qmmz2hxinp65zsprb3g92my7wqvbwncm-python3-3.11.9-env.drv
building '/nix/store/qmmz2hxinp65zsprb3g92my7wqvbwncm-python3-3.11.9-env.drv'...
created 516 symlinks in user environment
[WARN] - (starship::utils): Executing command "/home/ss/.nix-profile/bin/git" timed out.
[WARN] - (starship::utils): You can set command_timeout in your config to a higher value to allow longer-running commands to keep executing.
ss in 🌐 cs-338 in triton on  openai-triton [$] via ❄️  impure (shell) 
❯ python
Python 3.11.9 (main, Apr  2 2024, 08:25:04) [GCC 13.3.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import torch
>>> torch.cuda.is_available()
True
>>>
17:17:20
@yorickvp:matrix.orgyorickvpit probably works but still secretly links gcc-12.4.0, which isn't always fatal17:17:19
@ss:someonex.netSomeoneSerge (utc+3)No, it shouldn't17:17:33
@ss:someonex.netSomeoneSerge (utc+3)It definitely was the case that gcc-12 reference was not retained in the output path17:17:56
@yorickvp:matrix.orgyorickvp patchelf --print-rpath $(nix-build python3.pkgs.torch.lib)/lib/libtorch_cuda.so ? 17:18:22
@ss:someonex.netSomeoneSerge (utc+3)Yup, it's 12.3 in this commit and it happens to work, but yet again, this is a regression17:19:46

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