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Nix Data Science

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26 Jan 2024
@trexd:matrix.orgtrexd
In reply to @benoitdr:matrix.org
fully agree on that ... trexd , Can you clarify your request ?
I just meant /nix/store locally.
15:48:04
@benoitdr:matrix.orgbenoitdrOK sorry for confusion, personally I'll stick to a local minio server to store and share datasets locally. I tend to prefer a clear separation between code and data ;-)15:51:11
@benoitdr:matrix.orgbenoitdr

I have built a docker image of an application that requires nvidia/cuda using dockerTools.buildImage. The image runs fine with nvidia-docker -run .... however, when I start a container from the same image via docker-compose, I have the following error :

Error response from daemon: failed to create task for container: failed to create shim task: OCI runtime create failed: runc create failed: unable to start container process: error during container init: error running hook #0: error running hook: exit status 1, stdout: , stderr: nvidia-container-cli: ldcache error: process /nix/store/cx01qk0qyylvkgisbwc7d3pk8sliccgh-glibc-2.38-27-bin/bin/ldconfig failed with error code: 1: unknown

I have added the few lines that are usually required to run nvidia/cuda images with docker-compose :

    deploy:
        resources:
          reservations:
            devices:
              - driver: nvidia
                device_ids: ['0']
                capabilities: [gpu]

Note that other images (from docker hub) that require nvidia/cuda are working fine with these few lines.
Any idea what could go wrong ?

20:49:40
@ss:someonex.netSomeone Sdidn't read but do check out the nvidia-container-toolkit cdi PR maybe21:50:43
29 Jan 2024
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3 Feb 2024
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5 Feb 2024
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9 Feb 2024
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12 Feb 2024
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14 Feb 2024
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@user_5739:matrix.orguser_5739Hello All 👋 New to NixOS here but I need to be able to run a virtual env manager like miniconda. Anybody has any successes in this regard?12:56:13
@benoitdr:matrix.orgbenoitdrI think nix-shell is what you are looking for. Personally I completely gave up conda, venv and pip since I discovered nix ;-)13:26:59
17 Feb 2024
@user_5739:matrix.orguser_5739
In reply to@benoitdr:matrix.org
I think nix-shell is what you are looking for. Personally I completely gave up conda, venv and pip since I discovered nix ;-)
Interesting... I've been avoiding going out of the config file in terms of configuration. I'll try to use the nix-shell. Any guides you can recommend?
07:40:16
@ss:someonex.netSomeone S
In reply to @user_5739:matrix.org
Hello All 👋
New to NixOS here but I need to be able to run a virtual env manager like miniconda. Anybody has any successes in this regard?
I also use nixpkgs python3Packages as my main python distribution, but if you need conda then nix-ld + micromamba work fine
11:42:01
@benoitdr:matrix.orgbenoitdr
In reply to @user_5739:matrix.org
Interesting... I've been avoiding going out of the config file in terms of configuration. I'll try to use the nix-shell. Any guides you can recommend?
Follow the turorial on https://nix.dev/
12:55:34
19 Feb 2024
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@user_5739:matrix.orguser_5739Thank you both 🙂14:07:09
22 Feb 2024
@benoitdr:matrix.orgbenoitdrimage.png
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11:56:02
@benoitdr:matrix.orgbenoitdrHi folks, I have a weird problem with jupyterlab-git extension. The diffs appear inline instead of side-by-side as it should be (and as it is with the pip package). I suspect a missing dependency in jupyterlab-git. Anyone has seen this already ? any idea ?11:56:21
23 Feb 2024
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26 Feb 2024
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27 Feb 2024
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@nerves:bark.lgbtJason Odoomwhat version of tensorflow are you using? I seem t have problems building this when using a flake04:13:39
29 Feb 2024
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1 Mar 2024
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