| 1 Sep 2023 |
 maupind | Bruno Rodrigues: awesome, thank you! This is definitely a good start and I'll explore this and before trying Posit | 10:37:57 |
| 3 Sep 2023 |
 Bruno Rodrigues | friends, what do you use to build pipelines that integrate will with Nix? something that would let you build an environment and run a pipeline as simple as possible? me, coming from R I'm adding the command to run the pipeline in the shellHook of a shell (typically targets::tar_make) | 14:04:29 |
| Bruno Rodrigues | sou dropping in the shell starts the pipeline and then let's me explore the results | 14:05:00 |
| Bruno Rodrigues | I would imagine que there's likely a way to use nix itself to do it | 14:09:20 |
 CRTified | Maybe check out https://github.com/PapenfussLab/bionix - it appears to at least partially match your description (although I don't have any experience with it) | 14:10:17 |
| Bruno Rodrigues | yep I've taken a look at it already 😁 | 14:11:22 |
| CRTified | Can't really help further than that, I'm still pondering whether I should migrate our hpc cluster to NixOS, but my contract ends soon and I likely won't have enough time | 14:13:14 |
| CRTified | * Can't really help further than that, I'm still only pondering whether I should migrate our hpc cluster to NixOS, but my contract ends soon and I likely won't have enough time | 14:13:27 |
 jbedo | I use bionix pretty extensively, largest project currently involves processing ~90TiB of primary data | 21:43:06 |
| CRTified | In reply to @jb:vk3.wtf
I use bionix pretty extensively, largest project currently involves processing ~90TiB of primary data Does that dataset interact with the nix store in any way? Or is it kept separately? (Just asking, because I had some problems with putting just <30GB inside the store) | 21:45:02 |
