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Nix Data Science

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23 Mar 2023
@necrophcodr:matrix.orgnecrophcodrHeck I might also end up rolling my own solution that'll generate nix expressions for this instead, or generate an renv.lock from a nix expression.23:00:15
@necrophcodr:matrix.orgnecrophcodr I'd like to avoid doing that as it isn't as neat, but if R -e "renv::snapshot(type='all')" doesn't work, I might just end up going the long way around 23:00:53
@jb:vk3.wtfjbedo renv might be changing the library paths to only point at its project local dirs, you could read the R_LIBS_SITE environment variable and add them to your library paths after loading 23:03:21
@necrophcodr:matrix.orgnecrophcodrI'll make a note of that when I give this a shot tomorrow morning for sure. Thanks for all the tips so far either way!23:03:59
@jb:vk3.wtfjbedono worries :)23:04:25
24 Mar 2023
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23 Apr 2023
@mcwitt:matrix.orgmcwittAny users of https://github.com/tweag/jupyenv figured out how to add extensions that must be installed in the same Python env with JupyterLab? (e.g. https://github.com/mwouts/jupytext)19:08:24
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9 May 2023
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@carlthome:matrix.orgCarl Thomé Anyone working on packaging JAX to nixpkgs? It depends on tensorstore now which has a pretty involved Bazel build via Bazelisk via a setup.py so seemed kinda hairy to fix. 19:54:11
@carlthome:matrix.orgCarl Thomé *

Anyone working on packaging JAX to nixpkgs? It depends on tensorstore now which has a pretty involved Bazel build via Bazelisk via a setup.py so seemed kinda hairy to fix.

Guess prebuilt wheels from PyPI will be the way to go.

19:54:36
@peddie:matrix.orgpeddie
In reply to @carlthome:matrix.org

Anyone working on packaging JAX to nixpkgs? It depends on tensorstore now which has a pretty involved Bazel build via Bazelisk via a setup.py so seemed kinda hairy to fix.

Guess prebuilt wheels from PyPI will be the way to go.

asked about this on Nixpkgs Python and encountered similar silence, so my guess is nobody is working on it :/
22:45:02
10 May 2023
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14 May 2023
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15 May 2023
@tyberius_prime:matrix.orgTyberiusPrime changed their display name from TyberiusPrime (limited to 25 messages per 3 hours. Expect further significant reductions) to TyberiusPrime (oh iptables, why has thou forsaken me?).08:32:28
16 May 2023
@ss:someonex.netSomeoneSerge (UTC+2)
In reply to @carlthome:matrix.org

Anyone working on packaging JAX to nixpkgs? It depends on tensorstore now which has a pretty involved Bazel build via Bazelisk via a setup.py so seemed kinda hairy to fix.

Guess prebuilt wheels from PyPI will be the way to go.

Maybe https://github.com/NixOS/nixpkgs/pull/227145 @glepage:matrix.org
01:19:06

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